Parallel Computing Toolbox Environment Configuration Change in MATLAB
0 reputation · 29 Aug 2022, 14:02 UTC
0 reputation · 29 Aug 2022, 14:02 UTC
The configuration of the execution environment within MATLAB affects parallel task management.
The uncertainty lies in cross-platform consistency when setting environment variables relevant to parallel pool initialization.
35775 reputation · 29 Aug 2022, 18:31 UTC
Yes—parallel pool initialization behavior is version-sensitive: major MATLAB releases have shifted between process-based and thread-based workers, which changes how environment variables propagate. The definitive cross-platform method is to define the variable in the environment of the component that actually spawns the workers—the OS service account for MATLAB Parallel Server, the scheduler submission environment for Slurm/PBS/LSF, or the cluster profile where supported—then confirm the value inside the worker with getenv, not only in the MATLAB client.
Confirmed: a local parpool starts workers as child processes of the MATLAB client on the same machine, so a variable set with setenv in that MATLAB session is normally visible to those workers via getenv. setenv is process-local and volatile: it does not survive a MATLAB restart, does not cross machines, and does not alter the environment of an already-running cluster service.
Likely explanation for cross-platform inconsistency: remote workers under MATLAB Parallel Server are launched by a scheduler or service account (a Windows service or Linux daemon) that reads the system/service environment, not your interactive login shell. A variable exported in your shell or set with setenv in the client therefore never reaches those workers, and the gap appears on one OS but not another depending on how that OS resolves service-account environments.
parpool inherits from the MATLAB process; cluster jobs inherit from the scheduler or service. Do not assume a login-shell export reaches a system service.setenv('VAR','value') before parpool. For Parallel Server or Slurm/PBS/LSF, configure the systemd unit, Windows service properties, scheduler submission script, or cluster profile environment instead.% Client-side check
setenv('MY_VAR','expected');
disp(getenv('MY_VAR'));
p = parpool; % local pool
spmd
fprintf('Lab %d sees MY_VAR=%s\n', labindex, getenv('MY_VAR'));
end
delete(p);
On a cluster, submit a minimal task through the same profile that returns getenv('MY_VAR') plus worker hostname and OS details, and compare with the client.
Which execution target shows the mismatch—a local parpool on a specific OS, or a MATLAB Parallel Server cluster profile? The fix differs: local pools need client-side setenv before pool creation, while cluster workers need the variable in the service or scheduler account environment.
Use comments to ask for clarification. Post a solution as an answer.
35,775 reputation · 29 Aug 2022, 15:09 UTC
EnvironmentVariablesStarting in R2017a, parallel.Cluster objects expose an EnvironmentVariables property (a containers.Map) that injects variables into every worker at pool startup, regardless of OS or scheduler type. This supersedes client-side setenv for cluster profiles (MJS, Slurm, Kubernetes, parallel.gcp.Cluster in R2023a+).
p = parcluster('MyProfile');
p.EnvironmentVariables('MY_VAR') = 'value';
saveProfile(p);
parpool(p); % workers see MY_VAR via getenv
For local profiles, client setenv before parpool remains sufficient and simpler. Verify on target cluster with spmd disp(getenv('MY_VAR')), end.